Transcript: ENSMUST00000231989.2 Vmn2r99-202

Description

vomeronasal 2, receptor 99 [Source:MGI Symbol;Acc:MGI:3644540]

Gene Synonyms

EG665376

Location

Chromosome 17: 19,582,211-19,621,360 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 24 domains and features, is associated with 2432 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000090304.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000176107.3	Vmn2r99-201	9265	856aa	ENSMUSP00000135236.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS57046	H3BK37	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000231989.2	Vmn2r99-202	9392	620aa	ENSMUSP00000156067.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P728	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 9,392 bps, Translation length: 620 residues

Version

ENSMUST00000231989.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

RNA-Seq supported only

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000231989.2 Vmn2r99-202

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Transcript: ENSMUST00000231989.2 Vmn2r99-202

Summary

About Us

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