Transcript: ENSMUST00000136202.2 Fsip2-202

Description

fibrous sheath-interacting protein 2 [Source:MGI Symbol;Acc:MGI:2664111]

Gene Synonyms

OTTMUSG00000013335

Location

Chromosome 2: 82,779,844-82,795,834 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 1 domain and feature, is associated with 1136 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000075249.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000143764.9	Fsip2-203	21116	6995aa	ENSMUSP00000120314.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2ARZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000132967.2	Fsip2-201	3932	1009aa	ENSMUSP00000122350.2	Nonsense mediated decay	F7BGZ6	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000136202.2	Fsip2-202	740	135aa	ENSMUSP00000114196.2	Nonsense mediated decay	F6ZQI5	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 5, Transcript length: 740 bps, Translation length: 135 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSMUST00000136202.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000136202.2 Fsip2-202

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Transcript: ENSMUST00000136202.2 Fsip2-202

Summary

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