Transcript: ENSMUST00000232918.2 Zfp820-202

Description

zinc finger protein 820 [Source:MGI Symbol;Acc:MGI:1922674]

Gene Synonyms

2610036F08Rik

Location

Chromosome 17: 22,036,849-22,064,753 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 75 domains and features, is associated with 1718 variant alleles and maps to 174 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000069743.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000084141.6	Zfp820-201	3686	549aa	ENSMUSP00000081158.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49996	E9Q5G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000232918.2	Zfp820-202	2735	573aa	ENSMUSP00000156524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W7H5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,735 bps, Translation length: 573 residues

Version

ENSMUST00000232918.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000232918.2 Zfp820-202

Summary

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Transcript: ENSMUST00000232918.2 Zfp820-202

Summary

About Us

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