Description
RIKEN cDNA 5430401H09 gene [Source:MGI Symbol;Acc:MGI:1918646]
Location
Chromosome 12: 32,163,668-32,173,701 reverse strand.
About this transcript
This transcript has 2 exons, is associated with 1191 variant alleles and maps to 46 oligo probes.
Gene
This transcript is a product of gene ENSMUSG00000112071.3 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| ENSMUST00000218836.2 | 5430401H09Rik-202 | 2620 | No protein | - | lncRNA | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENSMUST00000245090.1 | 5430401H09Rik-236 | 2309 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000245460.1 | 5430401H09Rik-239 | 1871 | No protein | - | lncRNA | - | |
| ENSMUST00000243384.1 | 5430401H09Rik-221 | 1859 | No protein | - | lncRNA | - | |
| ENSMUST00000243436.1 | 5430401H09Rik-222 | 1813 | No protein | - | lncRNA | - | |
| ENSMUST00000245629.1 | 5430401H09Rik-241 | 1716 | No protein | - | lncRNA | - | |
| ENSMUST00000243723.1 | 5430401H09Rik-226 | 1712 | No protein | - | lncRNA | - | |
| ENSMUST00000241301.1 | 5430401H09Rik-204 | 1705 | No protein | - | lncRNA | - | |
| ENSMUST00000244953.1 | 5430401H09Rik-235 | 1690 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000242407.1 | 5430401H09Rik-210 | 1688 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000243056.1 | 5430401H09Rik-218 | 1665 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000242784.1 | 5430401H09Rik-214 | 1658 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000244938.1 | 5430401H09Rik-234 | 1652 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000242527.1 | 5430401H09Rik-211 | 1651 | No protein | - | lncRNA | - | |
| ENSMUST00000244287.1 | 5430401H09Rik-231 | 1644 | No protein | - | lncRNA | - | |
| ENSMUST00000243708.1 | 5430401H09Rik-225 | 1606 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000241440.1 | 5430401H09Rik-205 | 1598 | No protein | - | lncRNA | - | |
| ENSMUST00000245619.1 | 5430401H09Rik-240 | 1585 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000244074.1 | 5430401H09Rik-229 | 1569 | No protein | - | lncRNA | - | |
| ENSMUST00000243661.1 | 5430401H09Rik-224 | 1559 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000241927.1 | 5430401H09Rik-208 | 1556 | No protein | - | lncRNA | - | |
| ENSMUST00000243305.1 | 5430401H09Rik-220 | 1527 | No protein | - | lncRNA | - | |
| ENSMUST00000241162.1 | 5430401H09Rik-203 | 1520 | No protein | - | lncRNA | - | |
| ENSMUST00000244045.1 | 5430401H09Rik-228 | 1483 | No protein | - | lncRNA | - | |
| ENSMUST00000242881.1 | 5430401H09Rik-215 | 1480 | No protein | - | lncRNA | - | |
| ENSMUST00000243142.1 | 5430401H09Rik-219 | 1475 | No protein | - | lncRNA | - | |
| ENSMUST00000244533.1 | 5430401H09Rik-232 | 1464 | No protein | - | lncRNA | - | |
| ENSMUST00000241589.1 | 5430401H09Rik-206 | 1451 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000244184.1 | 5430401H09Rik-230 | 1437 | No protein | - | lncRNA | - | |
| ENSMUST00000245277.1 | 5430401H09Rik-238 | 1428 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000244659.1 | 5430401H09Rik-233 | 1426 | No protein | - | lncRNA | - | |
| ENSMUST00000242163.1 | 5430401H09Rik-209 | 1401 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000241901.1 | 5430401H09Rik-207 | 1291 | No protein | - | lncRNA | - | |
| ENSMUST00000243855.1 | 5430401H09Rik-227 | 1205 | No protein | - | lncRNA | - | |
| ENSMUST00000242672.1 | 5430401H09Rik-212 | 1157 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000245189.1 | 5430401H09Rik-237 | 1136 | No protein | - | lncRNA | - | |
| ENSMUST00000242921.1 | 5430401H09Rik-217 | 1098 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000218145.2 | 5430401H09Rik-201 | 1076 | No protein | - | lncRNA | TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, | |
| ENSMUST00000242739.1 | 5430401H09Rik-213 | 932 | No protein | - | lncRNA | - | |
| ENSMUST00000242883.1 | 5430401H09Rik-216 | 891 | No protein | - | lncRNA | - | |
| ENSMUST00000243629.1 | 5430401H09Rik-223 | 765 | No protein | - | lncRNA | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |