Transcript: ENSMUST00000180374.3 0610025J13Rik-203

Description

RIKEN cDNA 0610025J13 gene [Source:MGI Symbol;Acc:MGI:1915618]

Location

Chromosome 4: 98,209,685-98,220,028 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1188 variant alleles and maps to 88 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000046683.17 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000180374.3	0610025J13Rik-203	713	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000131516.8	0610025J13Rik-202	707	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000131324.2	0610025J13Rik-201	652	No protein	-	lncRNA	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 713 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000180374.3

Type

LncRNA

Annotation Method

Long intergenic non-coding RNAs (lincRNAs) were annotated by the Ensembl lincRNA annotation pipeline.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000180374.3 0610025J13Rik-203

Summary

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Transcript: ENSMUST00000180374.3 0610025J13Rik-203

Summary

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