Transcript: ENSMUST00000160211.2 Gstt4-202

Description

glutathione S-transferase, theta 4 [Source:MGI Symbol;Acc:MGI:1923136]

Gene Synonyms

4930583C14Rik

Location

Chromosome 10: 75,650,777-75,658,377 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 846 variant alleles and maps to 135 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000009093.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000160211.2	Gstt4-202	964	240aa	ENSMUSP00000125604.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23933	Q9D4P7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000159241.2	Gstt4-201	940	49aa	ENSMUSP00000124989.2	Nonsense mediated decay		E9PVU4	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 964 bps, Translation length: 240 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9D4P7

CCDS

This transcript is a member of the Mouse CCDS set: CCDS23933

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000160211.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000160211.2 Gstt4-202

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Transcript: ENSMUST00000160211.2 Gstt4-202

Summary

About Us

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