Transcript: ENSMUST00000051714.9 Lypd10-201

Description

Ly6/PLAUR domain containing 10 [Source:MGI Symbol;Acc:MGI:2681843]

Gene Synonyms

BC049730

Location

Chromosome 7: 24,408,684-24,413,960 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 839 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000045587.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000051714.9	Lypd10-201	1172	246aa	ENSMUSP00000053275.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20960	Q810N3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000206826.2	Lypd10-202	452	118aa	ENSMUSP00000145674.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0U1RNR5	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 1,172 bps, Translation length: 246 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20960

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000051714.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000051714.9 Lypd10-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000051714.9 Lypd10-201

Summary

About Us

Get help

Our sister sites

Follow us