Transcript: ENSMUST00000009392.6 Ascl2-201

Description

achaete-scute family bHLH transcription factor 2 [Source:MGI Symbol;Acc:MGI:96920]

Gene Synonyms

2410083I15Rik, Mash2, bHLHa45

Location

Chromosome 7: 142,520,566-142,523,001 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 486 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000009248.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000009392.6	Ascl2-201	1605	263aa	ENSMUSP00000009392.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS40194	O35885 Q3TJR9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000121862.3	Ascl2-202	814	195aa	ENSMUSP00000113012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3Z7Q6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,605 bps, Translation length: 263 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O35885

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40194

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000009392.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

downstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000009392.6 Ascl2-201

Summary

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Transcript: ENSMUST00000009392.6 Ascl2-201

Summary

About Us

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