Transcript: ENSMUST00000374105.1 Gm43357-214

Description

predicted gene 43357 [Source:MGI Symbol;Acc:MGI:5663494]

Location

Chromosome 3: 136,648,998-136,660,869 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 1080 variant alleles and maps to 10 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000106398.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000374094.1	Gm43357-203	331	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000374105.1	Gm43357-214	1008	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374106.1	Gm43357-215	928	No protein	-	lncRNA	-
ENSMUST00000374104.1	Gm43357-213	896	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374100.1	Gm43357-209	885	No protein	-	lncRNA	-
ENSMUST00000374113.1	Gm43357-222	875	No protein	-	lncRNA	-
ENSMUST00000374112.1	Gm43357-221	849	No protein	-	lncRNA	-
ENSMUST00000374099.1	Gm43357-208	822	No protein	-	lncRNA	-
ENSMUST00000374103.1	Gm43357-212	822	No protein	-	lncRNA	-
ENSMUST00000374101.1	Gm43357-210	723	No protein	-	lncRNA	-
ENSMUST00000374110.1	Gm43357-219	708	No protein	-	lncRNA	-
ENSMUST00000374096.1	Gm43357-205	696	No protein	-	lncRNA	-
ENSMUST00000374102.1	Gm43357-211	686	No protein	-	lncRNA	-
ENSMUST00000374109.1	Gm43357-218	682	No protein	-	lncRNA	-
ENSMUST00000374107.1	Gm43357-216	655	No protein	-	lncRNA	-
ENSMUST00000374095.1	Gm43357-204	617	No protein	-	lncRNA	-
ENSMUST00000196582.2	Gm43357-201	609	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000374097.1	Gm43357-206	578	No protein	-	lncRNA	-
ENSMUST00000374111.1	Gm43357-220	516	No protein	-	lncRNA	-
ENSMUST00000374098.1	Gm43357-207	362	No protein	-	lncRNA	-
ENSMUST00000197132.2	Gm43357-202	342	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000374108.1	Gm43357-217	337	No protein	-	lncRNA	-
ENSMUST00000374292.1	Gm43357-223	319	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,008 bps,

Version

ENSMUST00000374105.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000374105.1 Gm43357-214

Summary

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Transcript: ENSMUST00000374105.1 Gm43357-214

Summary

About Us

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