Transcript: ENSMUST00000373470.2

Description

novel protein similar to actin related protein 2/3 complex, subunit 1B Arpc1b

Location

Chromosome X: 59,090,279-59,096,207 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 1114 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000142832.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000373470.2	-	1481	372aa	ENSMUSP00000160222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000373469.2	-	1439	372aa	ENSMUSP00000160223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,481 bps, Translation length: 372 residues

Version

ENSMUST00000373470.2

Type

Protein coding

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000373470.2

Summary

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Transcript: ENSMUST00000373470.2

Summary

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