Transcript: ENSMUST00000318363.2

Description

novel protein similar to zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1

Location

Chromosome 11: 22,923,215-22,926,530 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 32 domains and features, is associated with 507 variant alleles and maps to 136 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121808.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000230879.3	-	3282	428aa	ENSMUSP00000160183.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36118	Q64707 Q793C9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000318363.2	-	1797	428aa	ENSMUSP00000160184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36118	Q64707 Q793C9	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,797 bps, Translation length: 428 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q64707

CCDS

This transcript is a member of the Mouse CCDS set: CCDS36118

Version

ENSMUST00000318363.2

Type

Protein coding

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000318363.2

Summary

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Transcript: ENSMUST00000318363.2

Summary

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