Transcript: ENSMUST00000297060.1 Gm12972-205

Description

predicted gene 12972 [Source:MGI Symbol;Acc:MGI:3650043]

Location

Chromosome 4: 130,513,377-130,515,168 forward strand.

About this transcript

This transcript has 3 exons, is associated with 672 variant alleles and maps to 42 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000086548.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000297057.1	Gm12972-202	655	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000297060.1	Gm12972-205	1198	No protein	-	lncRNA	-
ENSMUST00000152986.2	Gm12972-201	1006	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000297063.1	Gm12972-208	758	No protein	-	lncRNA	-
ENSMUST00000297068.1	Gm12972-213	725	No protein	-	lncRNA	-
ENSMUST00000297062.1	Gm12972-207	710	No protein	-	lncRNA	-
ENSMUST00000297061.1	Gm12972-206	664	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000297058.1	Gm12972-203	644	No protein	-	lncRNA	-
ENSMUST00000297065.1	Gm12972-210	635	No protein	-	lncRNA	-
ENSMUST00000297064.1	Gm12972-209	623	No protein	-	lncRNA	-
ENSMUST00000297059.1	Gm12972-204	622	No protein	-	lncRNA	-
ENSMUST00000297070.1	Gm12972-215	618	No protein	-	lncRNA	-
ENSMUST00000297066.1	Gm12972-211	594	No protein	-	lncRNA	-
ENSMUST00000297071.1	Gm12972-216	564	No protein	-	lncRNA	-
ENSMUST00000297069.1	Gm12972-214	561	No protein	-	lncRNA	-
ENSMUST00000297072.1	Gm12972-217	546	No protein	-	lncRNA	-
ENSMUST00000297073.1	Gm12972-218	525	No protein	-	lncRNA	-
ENSMUST00000297067.1	Gm12972-212	502	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,198 bps,

Version

ENSMUST00000297060.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000297060.1 Gm12972-205

Summary

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Transcript: ENSMUST00000297060.1 Gm12972-205

Summary

About Us

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