Transcript: ENSMUST00000276829.1 Gm45079-226

Description

predicted gene 45079 [Source:MGI Symbol;Acc:MGI:5753655]

Location

Chromosome 7: 120,858,741-120,904,270 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2666 variant alleles and maps to 5 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000108627.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000276827.1	Gm45079-224	623	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000276829.1	Gm45079-226	1019	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000276821.1	Gm45079-218	768	No protein	-	lncRNA	-
ENSMUST00000276830.1	Gm45079-227	754	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000276824.1	Gm45079-221	685	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000276819.1	Gm45079-216	634	No protein	-	lncRNA	-
ENSMUST00000276823.1	Gm45079-220	625	No protein	-	lncRNA	-
ENSMUST00000276806.1	Gm45079-203	609	No protein	-	lncRNA	-
ENSMUST00000205627.3	Gm45079-201	582	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000276820.1	Gm45079-217	581	No protein	-	lncRNA	-
ENSMUST00000276828.1	Gm45079-225	578	No protein	-	lncRNA	-
ENSMUST00000276822.1	Gm45079-219	558	No protein	-	lncRNA	-
ENSMUST00000276810.1	Gm45079-207	520	No protein	-	lncRNA	-
ENSMUST00000276825.1	Gm45079-222	518	No protein	-	lncRNA	-
ENSMUST00000276811.1	Gm45079-208	515	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000276809.1	Gm45079-206	512	No protein	-	lncRNA	-
ENSMUST00000276812.1	Gm45079-209	500	No protein	-	lncRNA	-
ENSMUST00000276807.1	Gm45079-204	496	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000276815.1	Gm45079-212	493	No protein	-	lncRNA	-
ENSMUST00000276814.1	Gm45079-211	487	No protein	-	lncRNA	-
ENSMUST00000276808.1	Gm45079-205	485	No protein	-	lncRNA	-
ENSMUST00000276805.1	Gm45079-202	483	No protein	-	lncRNA	-
ENSMUST00000276816.1	Gm45079-213	448	No protein	-	lncRNA	-
ENSMUST00000276813.1	Gm45079-210	401	No protein	-	lncRNA	-
ENSMUST00000276826.1	Gm45079-223	379	No protein	-	lncRNA	-
ENSMUST00000276817.1	Gm45079-214	349	No protein	-	lncRNA	-
ENSMUST00000276818.1	Gm45079-215	341	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,019 bps,

Version

ENSMUST00000276829.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000276829.1 Gm45079-226

Summary

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Transcript: ENSMUST00000276829.1 Gm45079-226

Summary

About Us

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