Transcript: ENSMUST00000272796.1 Gm28777-205

Description

predicted gene 28777 [Source:MGI Symbol;Acc:MGI:5579483]

Location

Chromosome 1: 53,226,812-53,236,854 forward strand.

About this transcript

This transcript has 4 exons, is associated with 1077 variant alleles and maps to 29 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000100763.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000272793.1	Gm28777-202	650	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000272796.1	Gm28777-205	756	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000272794.1	Gm28777-203	695	No protein	-	lncRNA	-
ENSMUST00000272795.1	Gm28777-204	641	No protein	-	lncRNA	-
ENSMUST00000191402.2	Gm28777-201	535	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000272797.1	Gm28777-206	422	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 756 bps,

Version

ENSMUST00000272796.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000272796.1 Gm28777-205

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000272796.1 Gm28777-205

Summary

About Us

Get help

Our sister sites

Follow us