Transcript: ENSMUST00000249418.1 Gm3373-202

Description

predicted gene 3373 [Source:MGI Symbol;Acc:MGI:3781551]

Gene Synonyms

Gm17143

Location

Chromosome 14: 16,727,577-16,751,416 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 123 variant alleles and maps to 1514 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000094370.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000177556.8	Gm3373-201	1955	205aa	ENSMUSP00000135906.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6NAS7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000249419.1	Gm3373-203	1965	89aa	ENSMUSP00000159756.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AA74KT55	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000249418.1	Gm3373-202	1878	205aa	ENSMUSP00000159755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6NAS7	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,878 bps, Translation length: 205 residues

Version

ENSMUST00000249418.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000249418.1 Gm3373-202

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Transcript: ENSMUST00000249418.1 Gm3373-202

Summary

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