Transcript: ENSMUST00000197735.2 Gm42901-201

Description

predicted gene 42901 [Source:MGI Symbol;Acc:MGI:5663038]

Location

Chromosome 3: 52,946,006-52,949,176 reverse strand.

About this transcript

This transcript has 1 exon, is associated with 575 variant alleles and maps to 11 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000104850.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000274813.1	Gm42901-202	2760	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000197735.2	Gm42901-201	3171	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000274819.1	Gm42901-208	1119	No protein	-	lncRNA	-
ENSMUST00000274818.1	Gm42901-207	1048	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000274820.1	Gm42901-209	1036	No protein	-	lncRNA	-
ENSMUST00000274817.1	Gm42901-206	939	No protein	-	lncRNA	-
ENSMUST00000274814.1	Gm42901-203	936	No protein	-	lncRNA	-
ENSMUST00000274816.1	Gm42901-205	849	No protein	-	lncRNA	-
ENSMUST00000274821.1	Gm42901-210	646	No protein	-	lncRNA	-
ENSMUST00000274815.1	Gm42901-204	578	No protein	-	lncRNA	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 3,171 bps,

Transcript Support Level (TSL)

TSL:NA

Version

ENSMUST00000197735.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000197735.2 Gm42901-201

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Transcript: ENSMUST00000197735.2 Gm42901-201

Summary

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