Transcript: ENSMUST00000190866.8 1700029B22Rik-203

Description

RIKEN cDNA 1700029B22 gene [Source:MGI Symbol;Acc:MGI:1916745]

Location

Chromosome 7: 130,748,140-130,752,310 forward strand.

About this transcript

This transcript has 5 exons, is associated with 757 variant alleles and maps to 37 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000100759.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000311154.1	1700029B22Rik-204	718	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000186532.8	1700029B22Rik-202	740	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000190866.8	1700029B22Rik-203	715	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000311161.1	1700029B22Rik-211	709	No protein	-	lncRNA	-
ENSMUST00000311155.1	1700029B22Rik-205	701	No protein	-	lncRNA	-
ENSMUST00000185969.3	1700029B22Rik-201	697	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000311156.1	1700029B22Rik-206	672	No protein	-	lncRNA	-
ENSMUST00000311160.1	1700029B22Rik-210	665	No protein	-	lncRNA	-
ENSMUST00000311163.1	1700029B22Rik-213	651	No protein	-	lncRNA	-
ENSMUST00000311158.1	1700029B22Rik-208	627	No protein	-	lncRNA	-
ENSMUST00000311157.1	1700029B22Rik-207	607	No protein	-	lncRNA	-
ENSMUST00000311159.1	1700029B22Rik-209	599	No protein	-	lncRNA	-
ENSMUST00000311162.1	1700029B22Rik-212	596	No protein	-	lncRNA	-
ENSMUST00000311168.1	1700029B22Rik-218	477	No protein	-	lncRNA	-
ENSMUST00000311164.1	1700029B22Rik-214	324	No protein	-	lncRNA	-
ENSMUST00000311165.1	1700029B22Rik-215	287	No protein	-	lncRNA	-
ENSMUST00000311166.1	1700029B22Rik-216	260	No protein	-	lncRNA	-
ENSMUST00000311167.1	1700029B22Rik-217	247	No protein	-	lncRNA	-
ENSMUST00000311170.1	1700029B22Rik-220	207	No protein	-	lncRNA	-
ENSMUST00000311169.1	1700029B22Rik-219	188	No protein	-	lncRNA	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 715 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000190866.8

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000190866.8 1700029B22Rik-203

Summary

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Transcript: ENSMUST00000190866.8 1700029B22Rik-203

Summary

About Us

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