Transcript: ENSMUST00000190673.4 2810030D12Rik-204

Description

RIKEN cDNA 2810030D12 gene [Source:MGI Symbol;Acc:MGI:1925585]

Location

Chromosome 8: 13,250,669-13,257,912 forward strand.

About this transcript

This transcript has 2 exons, is associated with 974 variant alleles and maps to 39 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000099338.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000240999.2	2810030D12Rik-206	1117	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000190461.3	2810030D12Rik-203	2031	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000246385.2	2810030D12Rik-211	1643	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270328.1	2810030D12Rik-224	1500	No protein	-	lncRNA	-
ENSMUST00000270327.1	2810030D12Rik-223	1279	No protein	-	lncRNA	-
ENSMUST00000187595.3	2810030D12Rik-202	1209	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000190673.4	2810030D12Rik-204	1174	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000242719.2	2810030D12Rik-208	1044	No protein	-	lncRNA	-
ENSMUST00000270316.1	2810030D12Rik-212	1042	No protein	-	lncRNA	-
ENSMUST00000185622.3	2810030D12Rik-201	1037	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241785.2	2810030D12Rik-207	997	No protein	-	lncRNA	-
ENSMUST00000270330.1	2810030D12Rik-226	980	No protein	-	lncRNA	-
ENSMUST00000244656.1	2810030D12Rik-210	978	No protein	-	lncRNA	-
ENSMUST00000270329.1	2810030D12Rik-225	967	No protein	-	lncRNA	-
ENSMUST00000270318.1	2810030D12Rik-214	797	No protein	-	lncRNA	-
ENSMUST00000270320.1	2810030D12Rik-216	752	No protein	-	lncRNA	-
ENSMUST00000270319.1	2810030D12Rik-215	734	No protein	-	lncRNA	-
ENSMUST00000270323.1	2810030D12Rik-219	686	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244479.2	2810030D12Rik-209	672	No protein	-	lncRNA	-
ENSMUST00000270321.1	2810030D12Rik-217	671	No protein	-	lncRNA	-
ENSMUST00000270325.1	2810030D12Rik-221	642	No protein	-	lncRNA	-
ENSMUST00000270324.1	2810030D12Rik-220	613	No protein	-	lncRNA	-
ENSMUST00000270317.1	2810030D12Rik-213	546	No protein	-	lncRNA	-
ENSMUST00000270326.1	2810030D12Rik-222	533	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000270322.1	2810030D12Rik-218	524	No protein	-	lncRNA	-
ENSMUST00000240987.2	2810030D12Rik-205	520	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,174 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000190673.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000190673.4 2810030D12Rik-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000190673.4 2810030D12Rik-204

Summary

About Us

Get help

Our sister sites

Follow us