Transcript: ENSMUST00000190465.3 2010010A06Rik-203

Description

RIKEN cDNA 2010010A06 gene [Source:NCBI gene (formerly Entrezgene);Acc:100503117]

Gene Synonyms

5033420E22Rik

Location

Chromosome 18: 75,421,700-75,430,400 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1272 variant alleles and maps to 53 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000121833.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000339599.1	2010010A06Rik-204	797	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000339602.1	2010010A06Rik-207	851	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339603.1	2010010A06Rik-208	810	No protein	-	lncRNA	-
ENSMUST00000339611.1	2010010A06Rik-216	757	No protein	-	lncRNA	-
ENSMUST00000186356.2	2010010A06Rik-202	694	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000190465.3	2010010A06Rik-203	688	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000339604.1	2010010A06Rik-209	667	No protein	-	lncRNA	-
ENSMUST00000339608.1	2010010A06Rik-213	653	No protein	-	lncRNA	-
ENSMUST00000339607.1	2010010A06Rik-212	640	No protein	-	lncRNA	-
ENSMUST00000339606.1	2010010A06Rik-211	618	No protein	-	lncRNA	-
ENSMUST00000339600.1	2010010A06Rik-205	617	No protein	-	lncRNA	-
ENSMUST00000339605.1	2010010A06Rik-210	589	No protein	-	lncRNA	-
ENSMUST00000339601.1	2010010A06Rik-206	556	No protein	-	lncRNA	-
ENSMUST00000339612.1	2010010A06Rik-217	546	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339610.1	2010010A06Rik-215	531	No protein	-	lncRNA	-
ENSMUST00000339609.1	2010010A06Rik-214	521	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 688 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000190465.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENSMUST00000190465.3 2010010A06Rik-203

Summary

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Transcript: ENSMUST00000190465.3 2010010A06Rik-203

Summary

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