Transcript: ENSMUST00000189445.3 Gm4035-201

Description

predicted gene 4035 [Source:MGI Symbol;Acc:MGI:3782209]

Location

Chromosome 13: 37,605,800-37,619,395 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1251 variant alleles and maps to 7 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000100760.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000303952.1	Gm4035-203	516	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000303954.1	Gm4035-205	845	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000303962.1	Gm4035-213	839	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000189445.3	Gm4035-201	834	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000190684.3	Gm4035-202	777	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000303960.1	Gm4035-211	680	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000303953.1	Gm4035-204	668	No protein	-	lncRNA	-
ENSMUST00000303957.1	Gm4035-208	655	No protein	-	lncRNA	-
ENSMUST00000303963.1	Gm4035-214	636	No protein	-	lncRNA	-
ENSMUST00000303966.1	Gm4035-217	630	No protein	-	lncRNA	-
ENSMUST00000303956.1	Gm4035-207	619	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000303961.1	Gm4035-212	554	No protein	-	lncRNA	-
ENSMUST00000303958.1	Gm4035-209	549	No protein	-	lncRNA	-
ENSMUST00000303959.1	Gm4035-210	538	No protein	-	lncRNA	-
ENSMUST00000303965.1	Gm4035-216	521	No protein	-	lncRNA	-
ENSMUST00000303955.1	Gm4035-206	510	No protein	-	lncRNA	-
ENSMUST00000303967.1	Gm4035-218	396	No protein	-	lncRNA	-
ENSMUST00000303964.1	Gm4035-215	367	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 834 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000189445.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000189445.3 Gm4035-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000189445.3 Gm4035-201

Summary

About Us

Get help

Our sister sites

Follow us