Transcript: ENSMUST00000187986.3 1700049E22Rik-201

Description

RIKEN cDNA 1700049E22 gene [Source:MGI Symbol;Acc:MGI:1920645]

Location

Chromosome 6: 100,504,310-100,510,653 forward strand.

About this transcript

This transcript has 4 exons, is associated with 997 variant alleles and maps to 51 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000101553.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000252926.1	1700049E22Rik-204	902	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000252927.1	1700049E22Rik-205	1055	No protein	-	lncRNA	-
ENSMUST00000242546.2	1700049E22Rik-202	999	No protein	-	lncRNA	-
ENSMUST00000252928.1	1700049E22Rik-206	989	No protein	-	lncRNA	-
ENSMUST00000252938.1	1700049E22Rik-216	912	No protein	-	lncRNA	-
ENSMUST00000252930.1	1700049E22Rik-208	909	No protein	-	lncRNA	-
ENSMUST00000252947.1	1700049E22Rik-225	904	No protein	-	lncRNA	-
ENSMUST00000252933.1	1700049E22Rik-211	873	No protein	-	lncRNA	-
ENSMUST00000252929.1	1700049E22Rik-207	852	No protein	-	lncRNA	-
ENSMUST00000252936.1	1700049E22Rik-214	851	No protein	-	lncRNA	-
ENSMUST00000187986.3	1700049E22Rik-201	824	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000252931.1	1700049E22Rik-209	793	No protein	-	lncRNA	-
ENSMUST00000252939.1	1700049E22Rik-217	779	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000252941.1	1700049E22Rik-219	769	No protein	-	lncRNA	-
ENSMUST00000252935.1	1700049E22Rik-213	759	No protein	-	lncRNA	-
ENSMUST00000245655.2	1700049E22Rik-203	740	No protein	-	lncRNA	-
ENSMUST00000252942.1	1700049E22Rik-220	723	No protein	-	lncRNA	-
ENSMUST00000252937.1	1700049E22Rik-215	715	No protein	-	lncRNA	-
ENSMUST00000252948.1	1700049E22Rik-226	703	No protein	-	lncRNA	-
ENSMUST00000252944.1	1700049E22Rik-222	702	No protein	-	lncRNA	-
ENSMUST00000252932.1	1700049E22Rik-210	700	No protein	-	lncRNA	-
ENSMUST00000252945.1	1700049E22Rik-223	653	No protein	-	lncRNA	-
ENSMUST00000252934.1	1700049E22Rik-212	626	No protein	-	lncRNA	-
ENSMUST00000252940.1	1700049E22Rik-218	619	No protein	-	lncRNA	-
ENSMUST00000252946.1	1700049E22Rik-224	616	No protein	-	lncRNA	-
ENSMUST00000252943.1	1700049E22Rik-221	590	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 824 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000187986.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000187986.3 1700049E22Rik-201

Summary

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Transcript: ENSMUST00000187986.3 1700049E22Rik-201

Summary

About Us

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