Transcript: ENSMUST00000185982.9 Lncpint-203

Description

long non-protein coding RNA, Trp53 induced transcript [Source:MGI Symbol;Acc:MGI:2673128]

Gene Synonyms

AB041803, Linc-Pint, Lincpint, MNCb-1768, Pint

Location

Chromosome 6: 31,142,446-31,195,642 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 2940 variant alleles and maps to 168 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000044471.15 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000230209.4	Lncpint-212	3705	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000115107.10	Lncpint-201	2689	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000188611.4	Lncpint-205	2145	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000185982.9	Lncpint-203	1959	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231007.4	Lncpint-215	1902	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000229711.3	Lncpint-209	1838	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000346448.1	Lncpint-229	1662	No protein	-	lncRNA	-
ENSMUST00000229076.2	Lncpint-206	1632	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000346458.1	Lncpint-239	1537	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000346447.1	Lncpint-228	1531	No protein	-	lncRNA	-
ENSMUST00000346449.1	Lncpint-230	1505	No protein	-	lncRNA	-
ENSMUST00000346462.1	Lncpint-243	1458	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000230874.4	Lncpint-214	1407	No protein	-	lncRNA	-
ENSMUST00000346450.1	Lncpint-231	1375	No protein	-	lncRNA	-
ENSMUST00000346452.1	Lncpint-233	1331	No protein	-	lncRNA	-
ENSMUST00000346451.1	Lncpint-232	1330	No protein	-	lncRNA	-
ENSMUST00000240923.2	Lncpint-217	1319	No protein	-	lncRNA	-
ENSMUST00000244420.2	Lncpint-219	1288	No protein	-	lncRNA	-
ENSMUST00000230091.2	Lncpint-211	1178	No protein	-	lncRNA	-
ENSMUST00000346459.1	Lncpint-240	1173	No protein	-	lncRNA	-
ENSMUST00000346443.1	Lncpint-224	1071	No protein	-	lncRNA	-
ENSMUST00000230832.3	Lncpint-213	1047	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000229116.2	Lncpint-207	961	No protein	-	lncRNA	-
ENSMUST00000346444.1	Lncpint-225	959	No protein	-	lncRNA	-
ENSMUST00000244850.1	Lncpint-220	942	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242445.2	Lncpint-218	935	No protein	-	lncRNA	-
ENSMUST00000346442.1	Lncpint-223	921	No protein	-	lncRNA	-
ENSMUST00000346460.1	Lncpint-241	866	No protein	-	lncRNA	-
ENSMUST00000250131.1	Lncpint-222	836	No protein	-	lncRNA	-
ENSMUST00000346463.1	Lncpint-244	774	No protein	-	lncRNA	-
ENSMUST00000346464.1	Lncpint-245	753	No protein	-	lncRNA	-
ENSMUST00000229779.2	Lncpint-210	683	No protein	-	lncRNA	-
ENSMUST00000346454.1	Lncpint-235	675	No protein	-	lncRNA	-
ENSMUST00000346456.1	Lncpint-237	661	No protein	-	lncRNA	-
ENSMUST00000187876.7	Lncpint-204	656	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000346453.1	Lncpint-234	616	No protein	-	lncRNA	-
ENSMUST00000346461.1	Lncpint-242	589	No protein	-	lncRNA	-
ENSMUST00000346446.1	Lncpint-227	579	No protein	-	lncRNA	-
ENSMUST00000346445.1	Lncpint-226	560	No protein	-	lncRNA	-
ENSMUST00000250130.1	Lncpint-221	554	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000346457.1	Lncpint-238	537	No protein	-	lncRNA	-
ENSMUST00000231083.2	Lncpint-216	431	No protein	-	lncRNA	-
ENSMUST00000346455.1	Lncpint-236	379	No protein	-	lncRNA	-
ENSMUST00000229299.2	Lncpint-208	260	No protein	-	lncRNA	-
ENSMUST00000123757.2	Lncpint-202	137	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,959 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000185982.9

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

NAGNAG splice site [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000185982.9 Lncpint-203

Summary

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Transcript: ENSMUST00000185982.9 Lncpint-203

Summary

About Us

Get help

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