Transcript: ENSMUST00000181269.5 Redrum-201

Description

Redrum, erythroid developmental long intergenic non-protein coding transcript [Source:MGI Symbol;Acc:MGI:1924683]

Gene Synonyms

9430076G02Rik

Location

Chromosome 18: 54,555,322-54,586,848 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2072 variant alleles and maps to 75 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000096982.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000257748.1	Redrum-206	2144	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000257750.1	Redrum-208	3871	No protein	-	lncRNA	-
ENSMUST00000242850.2	Redrum-205	3080	No protein	-	lncRNA	-
ENSMUST00000181269.5	Redrum-201	2755	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241315.1	Redrum-203	2735	No protein	-	lncRNA	-
ENSMUST00000257752.1	Redrum-210	2573	No protein	-	lncRNA	-
ENSMUST00000240996.1	Redrum-202	2563	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000257751.1	Redrum-209	2388	No protein	-	lncRNA	-
ENSMUST00000242827.1	Redrum-204	2382	No protein	-	lncRNA	-
ENSMUST00000257755.1	Redrum-213	2278	No protein	-	lncRNA	-
ENSMUST00000257749.1	Redrum-207	2051	No protein	-	lncRNA	-
ENSMUST00000257753.1	Redrum-211	1902	No protein	-	lncRNA	-
ENSMUST00000257754.1	Redrum-212	776	No protein	-	lncRNA	-
ENSMUST00000257757.1	Redrum-215	648	No protein	-	lncRNA	-
ENSMUST00000257756.1	Redrum-214	559	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,755 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000181269.5

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000181269.5 Redrum-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000181269.5 Redrum-201

Summary

About Us

Get help

Our sister sites

Follow us