Transcript: ENSMUST00000181149.3 B230354K17Rik-201

Description

RIKEN cDNA B230354K17 gene [Source:MGI Symbol;Acc:MGI:2443272]

Location

Chromosome 17: 45,744,734-45,753,470 forward strand.

About this transcript

This transcript has 3 exons, is associated with 802 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097119.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000372712.1	B230354K17Rik-205	1459	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000181149.3	B230354K17Rik-201	4941	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000233940.2	B230354K17Rik-204	2971	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000233673.2	B230354K17Rik-203	2578	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000372719.1	B230354K17Rik-212	1593	No protein	-	lncRNA	-
ENSMUST00000372725.1	B230354K17Rik-218	1387	No protein	-	lncRNA	-
ENSMUST00000233097.3	B230354K17Rik-202	1376	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000372721.1	B230354K17Rik-214	1127	No protein	-	lncRNA	-
ENSMUST00000372718.1	B230354K17Rik-211	1123	No protein	-	lncRNA	-
ENSMUST00000372722.1	B230354K17Rik-215	1044	No protein	-	lncRNA	-
ENSMUST00000372717.1	B230354K17Rik-210	930	No protein	-	lncRNA	-
ENSMUST00000372724.1	B230354K17Rik-217	901	No protein	-	lncRNA	-
ENSMUST00000372713.1	B230354K17Rik-206	849	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000372720.1	B230354K17Rik-213	774	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000372715.1	B230354K17Rik-208	760	No protein	-	lncRNA	-
ENSMUST00000372716.1	B230354K17Rik-209	737	No protein	-	lncRNA	-
ENSMUST00000372714.1	B230354K17Rik-207	728	No protein	-	lncRNA	-
ENSMUST00000372723.1	B230354K17Rik-216	724	No protein	-	lncRNA	-
ENSMUST00000372726.1	B230354K17Rik-219	633	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 4,941 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000181149.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000181149.3 B230354K17Rik-201

Summary

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Transcript: ENSMUST00000181149.3 B230354K17Rik-201

Summary

About Us

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