Transcript: ENSMUST00000180701.4 4930500F10Rik-201

Description

RIKEN cDNA 4930500F10 gene [Source:MGI Symbol;Acc:MGI:1922262]

Location

Chromosome 9: 106,125,119-106,126,612 forward strand.

About this transcript

This transcript has 2 exons, is associated with 633 variant alleles and maps to 51 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097592.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000363140.1	4930500F10Rik-202	1603	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363177.1	4930500F10Rik-239	2381	No protein	-	lncRNA	-
ENSMUST00000363182.1	4930500F10Rik-244	1502	No protein	-	lncRNA	-
ENSMUST00000363148.1	4930500F10Rik-210	1448	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363150.1	4930500F10Rik-212	1422	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363178.1	4930500F10Rik-240	1373	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363180.1	4930500F10Rik-242	1360	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000180701.4	4930500F10Rik-201	1264	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000363162.1	4930500F10Rik-224	1249	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363176.1	4930500F10Rik-238	1235	No protein	-	lncRNA	-
ENSMUST00000363183.1	4930500F10Rik-245	1197	No protein	-	lncRNA	-
ENSMUST00000363174.1	4930500F10Rik-236	1196	No protein	-	lncRNA	-
ENSMUST00000363142.1	4930500F10Rik-204	1145	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363188.1	4930500F10Rik-250	1104	No protein	-	lncRNA	-
ENSMUST00000363197.1	4930500F10Rik-259	1102	No protein	-	lncRNA	-
ENSMUST00000363141.1	4930500F10Rik-203	1083	No protein	-	lncRNA	-
ENSMUST00000363184.1	4930500F10Rik-246	1056	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363175.1	4930500F10Rik-237	1053	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363189.1	4930500F10Rik-251	1026	No protein	-	lncRNA	-
ENSMUST00000363190.1	4930500F10Rik-252	975	No protein	-	lncRNA	-
ENSMUST00000363145.1	4930500F10Rik-207	952	No protein	-	lncRNA	-
ENSMUST00000363161.1	4930500F10Rik-223	951	No protein	-	lncRNA	-
ENSMUST00000363179.1	4930500F10Rik-241	936	No protein	-	lncRNA	-
ENSMUST00000363194.1	4930500F10Rik-256	928	No protein	-	lncRNA	-
ENSMUST00000363151.1	4930500F10Rik-213	925	No protein	-	lncRNA	-
ENSMUST00000363143.1	4930500F10Rik-205	917	No protein	-	lncRNA	-
ENSMUST00000363198.1	4930500F10Rik-260	915	No protein	-	lncRNA	-
ENSMUST00000363149.1	4930500F10Rik-211	883	No protein	-	lncRNA	-
ENSMUST00000363170.1	4930500F10Rik-232	863	No protein	-	lncRNA	-
ENSMUST00000363155.1	4930500F10Rik-217	856	No protein	-	lncRNA	-
ENSMUST00000363201.1	4930500F10Rik-263	851	No protein	-	lncRNA	-
ENSMUST00000363195.1	4930500F10Rik-257	847	No protein	-	lncRNA	-
ENSMUST00000363181.1	4930500F10Rik-243	843	No protein	-	lncRNA	-
ENSMUST00000363144.1	4930500F10Rik-206	824	No protein	-	lncRNA	-
ENSMUST00000363171.1	4930500F10Rik-233	822	No protein	-	lncRNA	-
ENSMUST00000363203.1	4930500F10Rik-265	822	No protein	-	lncRNA	-
ENSMUST00000363153.1	4930500F10Rik-215	801	No protein	-	lncRNA	-
ENSMUST00000363173.1	4930500F10Rik-235	787	No protein	-	lncRNA	-
ENSMUST00000363166.1	4930500F10Rik-228	770	No protein	-	lncRNA	-
ENSMUST00000363200.1	4930500F10Rik-262	767	No protein	-	lncRNA	-
ENSMUST00000363147.1	4930500F10Rik-209	761	No protein	-	lncRNA	-
ENSMUST00000363156.1	4930500F10Rik-218	746	No protein	-	lncRNA	-
ENSMUST00000363202.1	4930500F10Rik-264	717	No protein	-	lncRNA	-
ENSMUST00000363154.1	4930500F10Rik-216	697	No protein	-	lncRNA	-
ENSMUST00000363172.1	4930500F10Rik-234	683	No protein	-	lncRNA	-
ENSMUST00000363187.1	4930500F10Rik-249	678	No protein	-	lncRNA	-
ENSMUST00000363159.1	4930500F10Rik-221	656	No protein	-	lncRNA	-
ENSMUST00000363169.1	4930500F10Rik-231	647	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363193.1	4930500F10Rik-255	640	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363163.1	4930500F10Rik-225	638	No protein	-	lncRNA	-
ENSMUST00000363164.1	4930500F10Rik-226	615	No protein	-	lncRNA	-
ENSMUST00000363160.1	4930500F10Rik-222	596	No protein	-	lncRNA	-
ENSMUST00000363185.1	4930500F10Rik-247	583	No protein	-	lncRNA	-
ENSMUST00000363146.1	4930500F10Rik-208	578	No protein	-	lncRNA	-
ENSMUST00000363186.1	4930500F10Rik-248	568	No protein	-	lncRNA	-
ENSMUST00000363157.1	4930500F10Rik-219	553	No protein	-	lncRNA	-
ENSMUST00000363196.1	4930500F10Rik-258	546	No protein	-	lncRNA	-
ENSMUST00000363152.1	4930500F10Rik-214	517	No protein	-	lncRNA	-
ENSMUST00000363158.1	4930500F10Rik-220	498	No protein	-	lncRNA	-
ENSMUST00000363191.1	4930500F10Rik-253	487	No protein	-	lncRNA	-
ENSMUST00000363199.1	4930500F10Rik-261	441	No protein	-	lncRNA	-
ENSMUST00000363167.1	4930500F10Rik-229	435	No protein	-	lncRNA	-
ENSMUST00000363204.1	4930500F10Rik-266	425	No protein	-	lncRNA	-
ENSMUST00000363168.1	4930500F10Rik-230	384	No protein	-	lncRNA	-
ENSMUST00000363192.1	4930500F10Rik-254	336	No protein	-	lncRNA	-
ENSMUST00000363165.1	4930500F10Rik-227	265	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,264 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000180701.4

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000180701.4 4930500F10Rik-201

Summary

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Transcript: ENSMUST00000180701.4 4930500F10Rik-201

Summary

About Us

Get help

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