Transcript: ENSMUST00000180518.3 Gm2093-201

Description

predicted gene 2093 [Source:MGI Symbol;Acc:MGI:3780260]

Location

Chromosome 15: 4,025,273-4,045,340 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1352 variant alleles and maps to 74 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000097662.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000374927.1	Gm2093-202	919	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000180518.3	Gm2093-201	3774	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000374938.1	Gm2093-213	751	No protein	-	lncRNA	-
ENSMUST00000374928.1	Gm2093-203	694	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374929.1	Gm2093-204	642	No protein	-	lncRNA	-
ENSMUST00000374931.1	Gm2093-206	607	No protein	-	lncRNA	-
ENSMUST00000374939.1	Gm2093-214	598	No protein	-	lncRNA	-
ENSMUST00000374935.1	Gm2093-210	590	No protein	-	lncRNA	-
ENSMUST00000374930.1	Gm2093-205	586	No protein	-	lncRNA	-
ENSMUST00000374936.1	Gm2093-211	574	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000374934.1	Gm2093-209	536	No protein	-	lncRNA	-
ENSMUST00000374932.1	Gm2093-207	527	No protein	-	lncRNA	-
ENSMUST00000374933.1	Gm2093-208	508	No protein	-	lncRNA	-
ENSMUST00000374937.1	Gm2093-212	450	No protein	-	lncRNA	-
ENSMUST00000374940.1	Gm2093-215	322	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,774 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000180518.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000180518.3 Gm2093-201

Summary

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Transcript: ENSMUST00000180518.3 Gm2093-201

Summary

About Us

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