Transcript: ENSMUST00000178424.3 Gm21859-201

Description

predicted gene, 21859 [Source:MGI Symbol;Acc:MGI:5434023]

Location

Chromosome 16: 10,729,876-10,777,048 reverse strand.

About this transcript

This transcript has 9 exons, is associated with 3249 variant alleles and maps to 66 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000095369.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000335662.1	Gm21859-203	1481	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000178424.3	Gm21859-201	1818	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000335664.1	Gm21859-205	1762	No protein	-	lncRNA	-
ENSMUST00000335663.1	Gm21859-204	1692	No protein	-	lncRNA	-
ENSMUST00000335665.1	Gm21859-206	1323	No protein	-	lncRNA	-
ENSMUST00000335666.1	Gm21859-207	1218	No protein	-	lncRNA	-
ENSMUST00000335668.1	Gm21859-209	1011	No protein	-	lncRNA	-
ENSMUST00000335667.1	Gm21859-208	987	No protein	-	lncRNA	-
ENSMUST00000233047.2	Gm21859-202	921	No protein	-	lncRNA	-

Summary

Statistics

Exons: 9, Coding exons: 0, Transcript length: 1,818 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000178424.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000178424.3 Gm21859-201

Summary

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Transcript: ENSMUST00000178424.3 Gm21859-201

Summary

About Us

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