Transcript: ENSMUST00000176744.3 Gm20684-201

Description

predicted gene 20684 [Source:MGI Symbol;Acc:MGI:5313131]

Location

Chromosome 7: 65,508,996-65,511,773 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 724 variant alleles and maps to 26 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000093405.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000267679.1	Gm20684-202	2003	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000267691.1	Gm20684-214	2088	No protein	-	lncRNA	-
ENSMUST00000267687.1	Gm20684-210	1765	No protein	-	lncRNA	-
ENSMUST00000267690.1	Gm20684-213	1721	No protein	-	lncRNA	-
ENSMUST00000267684.1	Gm20684-207	1661	No protein	-	lncRNA	-
ENSMUST00000267683.1	Gm20684-206	1639	No protein	-	lncRNA	-
ENSMUST00000267680.1	Gm20684-203	1569	No protein	-	lncRNA	-
ENSMUST00000176744.3	Gm20684-201	1556	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000267689.1	Gm20684-212	1524	No protein	-	lncRNA	-
ENSMUST00000267688.1	Gm20684-211	1466	No protein	-	lncRNA	-
ENSMUST00000267682.1	Gm20684-205	1465	No protein	-	lncRNA	-
ENSMUST00000267685.1	Gm20684-208	1439	No protein	-	lncRNA	-
ENSMUST00000267681.1	Gm20684-204	1416	No protein	-	lncRNA	-
ENSMUST00000267686.1	Gm20684-209	927	No protein	-	lncRNA	-
ENSMUST00000267693.1	Gm20684-216	893	No protein	-	lncRNA	-
ENSMUST00000267692.1	Gm20684-215	693	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,556 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENSMUST00000176744.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000176744.3 Gm20684-201

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Transcript: ENSMUST00000176744.3 Gm20684-201

Summary

About Us

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