Transcript: ENSMUST00000172483.3 Lncob1-201

Description

lncRNA osteoblastogenesis associated 1 [Source:MGI Symbol;Acc:MGI:5141977]

Gene Synonyms

Gm20512, lnc-Ob1

Location

Chromosome 7: 19,448,904-19,455,665 forward strand.

About this transcript

This transcript has 2 exons, is associated with 856 variant alleles and maps to 34 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000092381.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000172483.3	Lncob1-201	664	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000254208.1	Lncob1-202	640	No protein	-	lncRNA	-
ENSMUST00000254209.1	Lncob1-203	592	No protein	-	lncRNA	-
ENSMUST00000254211.1	Lncob1-205	539	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254213.1	Lncob1-207	495	No protein	-	lncRNA	-
ENSMUST00000254210.1	Lncob1-204	471	No protein	-	lncRNA	-
ENSMUST00000254212.1	Lncob1-206	407	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 664 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000172483.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000172483.3 Lncob1-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000172483.3 Lncob1-201

Summary

About Us

Get help

Our sister sites

Follow us