Transcript: ENSMUST00000160494.5 2410124H12Rik-201

Description

RIKEN cDNA 2410124H12 gene [Source:MGI Symbol;Acc:MGI:1924035]

Location

Chromosome 16: 92,267,791-92,294,271 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2252 variant alleles and maps to 132 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000051297.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000377532.1	2410124H12Rik-203	1640	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000377540.1	2410124H12Rik-211	1056	No protein	-	lncRNA	-
ENSMUST00000377534.1	2410124H12Rik-205	1036	No protein	-	lncRNA	-
ENSMUST00000160494.5	2410124H12Rik-201	1027	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000245313.2	2410124H12Rik-202	1022	No protein	-	lncRNA	-
ENSMUST00000377539.1	2410124H12Rik-210	906	No protein	-	lncRNA	-
ENSMUST00000377533.1	2410124H12Rik-204	854	No protein	-	lncRNA	-
ENSMUST00000377536.1	2410124H12Rik-207	841	No protein	-	lncRNA	-
ENSMUST00000377545.1	2410124H12Rik-213	816	No protein	-	lncRNA	-
ENSMUST00000377544.1	2410124H12Rik-212	789	No protein	-	lncRNA	-
ENSMUST00000377535.1	2410124H12Rik-206	622	No protein	-	lncRNA	-
ENSMUST00000377537.1	2410124H12Rik-208	587	No protein	-	lncRNA	-
ENSMUST00000377546.1	2410124H12Rik-214	475	No protein	-	lncRNA	-
ENSMUST00000377538.1	2410124H12Rik-209	442	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,027 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000160494.5

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSMUST00000160494.5 2410124H12Rik-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000160494.5 2410124H12Rik-201

Summary

About Us

Get help

Our sister sites

Follow us