Transcript: ENSMUST00000153958.2 Gm15327-202

Description

predicted gene 15327 [Source:MGI Symbol;Acc:MGI:3705295]

Location

Chromosome 13: 111,947,002-111,947,573 forward strand.

About this transcript

This transcript has 2 exons, is associated with 576 variant alleles and maps to 17 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000085204.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000348098.1	Gm15327-203	309	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000348108.1	Gm15327-213	672	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348113.1	Gm15327-218	607	No protein	-	lncRNA	-
ENSMUST00000348109.1	Gm15327-214	604	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348107.1	Gm15327-212	567	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348102.1	Gm15327-207	565	No protein	-	lncRNA	-
ENSMUST00000348106.1	Gm15327-211	556	No protein	-	lncRNA	-
ENSMUST00000348110.1	Gm15327-215	553	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348116.1	Gm15327-221	510	No protein	-	lncRNA	-
ENSMUST00000348112.1	Gm15327-217	508	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348104.1	Gm15327-209	498	No protein	-	lncRNA	-
ENSMUST00000348105.1	Gm15327-210	497	No protein	-	lncRNA	-
ENSMUST00000348111.1	Gm15327-216	475	No protein	-	lncRNA	-
ENSMUST00000348101.1	Gm15327-206	468	No protein	-	lncRNA	-
ENSMUST00000149252.3	Gm15327-201	467	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000153958.2	Gm15327-202	467	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000348115.1	Gm15327-220	466	No protein	-	lncRNA	-
ENSMUST00000348100.1	Gm15327-205	423	No protein	-	lncRNA	-
ENSMUST00000348114.1	Gm15327-219	412	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000348103.1	Gm15327-208	397	No protein	-	lncRNA	-
ENSMUST00000348099.1	Gm15327-204	290	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 467 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000153958.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSMUST00000153958.2 Gm15327-202

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Transcript: ENSMUST00000153958.2 Gm15327-202

Summary

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