Transcript: ENSMUST00000153297.3 Plekhd1os-201

Description

pleckstrin homology domain containing, family D (with coiled-coil domains) member 1, opposite strand [Source:MGI Symbol;Acc:MGI:1915604]

Gene Synonyms

0610009B14Rik

Location

Chromosome 12: 80,733,141-80,739,508 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 713 variant alleles and maps to 129 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000044062.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000355638.1	Plekhd1os-202	970	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000153297.3	Plekhd1os-201	1215	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000355640.1	Plekhd1os-204	1061	No protein	-	lncRNA	-
ENSMUST00000355642.1	Plekhd1os-206	847	No protein	-	lncRNA	-
ENSMUST00000355639.1	Plekhd1os-203	815	No protein	-	lncRNA	-
ENSMUST00000355641.1	Plekhd1os-205	544	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,215 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000153297.3

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000153297.3 Plekhd1os-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSMUST00000153297.3 Plekhd1os-201

Summary

About Us

Get help

Our sister sites

Follow us