Transcript: ENSMUST00000149506.10 A230056P14Rik-202

Description

RIKEN cDNA A230056P14 gene [Source:MGI Symbol;Acc:MGI:2444856]

Location

Chromosome 7: 55,612,104-55,622,830 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1217 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000087178.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000130189.3	A230056P14Rik-201	2197	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000310054.1	A230056P14Rik-206	2318	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310055.1	A230056P14Rik-207	2175	No protein	-	lncRNA	-
ENSMUST00000310056.1	A230056P14Rik-208	1831	No protein	-	lncRNA	-
ENSMUST00000310061.1	A230056P14Rik-213	1286	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241445.2	A230056P14Rik-203	1090	No protein	-	lncRNA	-
ENSMUST00000310057.1	A230056P14Rik-209	1084	No protein	-	lncRNA	-
ENSMUST00000310060.1	A230056P14Rik-212	947	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000310059.1	A230056P14Rik-211	822	No protein	-	lncRNA	-
ENSMUST00000247096.2	A230056P14Rik-204	796	No protein	-	lncRNA	-
ENSMUST00000310058.1	A230056P14Rik-210	780	No protein	-	lncRNA	-
ENSMUST00000149506.10	A230056P14Rik-202	645	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000247459.2	A230056P14Rik-205	471	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 645 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000149506.10

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENSMUST00000149506.10 A230056P14Rik-202

Summary

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Transcript: ENSMUST00000149506.10 A230056P14Rik-202

Summary

About Us

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