Transcript: ENSMUST00000148466.3 A930024E05Rik-201

Description

RIKEN cDNA A930024E05 gene [Source:MGI Symbol;Acc:MGI:1924414]

Gene Synonyms

Kancr, LncKdm2b

Location

Chromosome 5: 123,127,201-123,136,412 forward strand.

About this transcript

This transcript has 3 exons, is associated with 969 variant alleles and maps to 152 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000056735.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000371098.1	A930024E05Rik-203	1457	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000371105.1	A930024E05Rik-210	2155	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000148466.3	A930024E05Rik-201	2116	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000371102.1	A930024E05Rik-207	2031	No protein	-	lncRNA	-
ENSMUST00000244240.2	A930024E05Rik-202	1377	No protein	-	lncRNA	-
ENSMUST00000371100.1	A930024E05Rik-205	946	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371103.1	A930024E05Rik-208	878	No protein	-	lncRNA	-
ENSMUST00000371101.1	A930024E05Rik-206	776	No protein	-	lncRNA	-
ENSMUST00000371104.1	A930024E05Rik-209	699	No protein	-	lncRNA	-
ENSMUST00000371099.1	A930024E05Rik-204	666	No protein	-	lncRNA	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,116 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000148466.3

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000148466.3 A930024E05Rik-201

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Transcript: ENSMUST00000148466.3 A930024E05Rik-201

Summary

About Us

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