Transcript: ENSMUST00000133091.2 4933416E03Rik-201

Description

RIKEN cDNA 4933416E03 gene [Source:MGI Symbol;Acc:MGI:1918331]

Location

Chromosome 2: 159,789,261-159,823,208 forward strand.

About this transcript

This transcript has 7 exons, is associated with 2751 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000085198.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000364794.1	4933416E03Rik-202	1192	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000364802.1	4933416E03Rik-210	1419	No protein	-	lncRNA	-
ENSMUST00000364796.1	4933416E03Rik-204	1407	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000364799.1	4933416E03Rik-207	1273	No protein	-	lncRNA	-
ENSMUST00000364798.1	4933416E03Rik-206	1265	No protein	-	lncRNA	-
ENSMUST00000364803.1	4933416E03Rik-211	1207	No protein	-	lncRNA	-
ENSMUST00000364801.1	4933416E03Rik-209	1164	No protein	-	lncRNA	-
ENSMUST00000133091.2	4933416E03Rik-201	1126	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000364797.1	4933416E03Rik-205	1122	No protein	-	lncRNA	-
ENSMUST00000364795.1	4933416E03Rik-203	1059	No protein	-	lncRNA	-
ENSMUST00000364800.1	4933416E03Rik-208	1048	No protein	-	lncRNA	-
ENSMUST00000364804.1	4933416E03Rik-212	865	No protein	-	lncRNA	-
ENSMUST00000364805.1	4933416E03Rik-213	824	No protein	-	lncRNA	-
ENSMUST00000364816.1	4933416E03Rik-220	677	No protein	-	lncRNA	-
ENSMUST00000364806.1	4933416E03Rik-214	538	No protein	-	lncRNA	-
ENSMUST00000364809.1	4933416E03Rik-216	451	No protein	-	lncRNA	-
ENSMUST00000364811.1	4933416E03Rik-217	441	No protein	-	lncRNA	-
ENSMUST00000364807.1	4933416E03Rik-215	351	No protein	-	lncRNA	-
ENSMUST00000364814.1	4933416E03Rik-219	343	No protein	-	lncRNA	-
ENSMUST00000364812.1	4933416E03Rik-218	334	No protein	-	lncRNA	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,126 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000133091.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000133091.2 4933416E03Rik-201

Summary

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Transcript: ENSMUST00000133091.2 4933416E03Rik-201

Summary

About Us

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