Transcript: ENSMUST00000132609.2 4933424M12Rik-201

Description

RIKEN cDNA 4933424M12 gene [Source:MGI Symbol;Acc:MGI:1914798]

Location

Chromosome 4: 107,645,046-107,647,118 forward strand.

About this transcript

This transcript has 2 exons, is associated with 698 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000087289.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000358007.1	4933424M12Rik-206	1002	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000132609.2	4933424M12Rik-201	1944	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000242268.1	4933424M12Rik-204	1703	No protein	-	lncRNA	-
ENSMUST00000358009.1	4933424M12Rik-208	1623	No protein	-	lncRNA	-
ENSMUST00000241671.2	4933424M12Rik-203	1588	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000358010.1	4933424M12Rik-209	1540	No protein	-	lncRNA	-
ENSMUST00000358008.1	4933424M12Rik-207	1509	No protein	-	lncRNA	-
ENSMUST00000358011.1	4933424M12Rik-210	1396	No protein	-	lncRNA	-
ENSMUST00000358012.1	4933424M12Rik-211	1215	No protein	-	lncRNA	-
ENSMUST00000203451.4	4933424M12Rik-202	1162	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000244456.1	4933424M12Rik-205	1079	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,944 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000132609.2

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000132609.2 4933424M12Rik-201

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Transcript: ENSMUST00000132609.2 4933424M12Rik-201

Summary

About Us

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