Transcript: ENSMUST00000131457.3 Gm13580-201

Description

predicted gene 13580 [Source:MGI Symbol;Acc:MGI:3650460]

Location

Chromosome 2: 60,214,609-60,243,113 forward strand.

About this transcript

This transcript has 4 exons, is associated with 2140 variant alleles and maps to 40 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000087283.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000131457.3	Gm13580-201	900	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000379457.1	Gm13580-203	1256	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379460.1	Gm13580-206	1239	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379458.1	Gm13580-204	1033	No protein	-	lncRNA	-
ENSMUST00000379468.1	Gm13580-214	860	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379462.1	Gm13580-208	854	No protein	-	lncRNA	-
ENSMUST00000379466.1	Gm13580-212	821	No protein	-	lncRNA	-
ENSMUST00000379470.1	Gm13580-216	799	No protein	-	lncRNA	-
ENSMUST00000379471.1	Gm13580-217	767	No protein	-	lncRNA	-
ENSMUST00000379472.1	Gm13580-218	761	No protein	-	lncRNA	-
ENSMUST00000379476.1	Gm13580-222	730	No protein	-	lncRNA	-
ENSMUST00000379465.1	Gm13580-211	690	No protein	-	lncRNA	-
ENSMUST00000379456.1	Gm13580-202	676	No protein	-	lncRNA	-
ENSMUST00000379461.1	Gm13580-207	649	No protein	-	lncRNA	-
ENSMUST00000379467.1	Gm13580-213	617	No protein	-	lncRNA	-
ENSMUST00000379459.1	Gm13580-205	593	No protein	-	lncRNA	-
ENSMUST00000379474.1	Gm13580-220	582	No protein	-	lncRNA	-
ENSMUST00000379475.1	Gm13580-221	562	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379463.1	Gm13580-209	545	No protein	-	lncRNA	-
ENSMUST00000379469.1	Gm13580-215	488	No protein	-	lncRNA	-
ENSMUST00000379473.1	Gm13580-219	451	No protein	-	lncRNA	-
ENSMUST00000379464.1	Gm13580-210	340	No protein	-	lncRNA	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 900 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000131457.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENSMUST00000131457.3 Gm13580-201

Summary

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Transcript: ENSMUST00000131457.3 Gm13580-201

Summary

About Us

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