Transcript: ENSMUST00000105408.5 Gm10941-201

Description

predicted gene 10941 [Source:MGI Symbol;Acc:MGI:3779151]

Location

Chromosome 10: 77,093,578-77,095,086 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 646 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000078444.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000367249.1	Gm10941-202	1060	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000105408.5	Gm10941-201	769	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000367254.1	Gm10941-207	669	No protein	-	lncRNA	-
ENSMUST00000367253.1	Gm10941-206	652	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367250.1	Gm10941-203	571	No protein	-	lncRNA	-
ENSMUST00000367251.1	Gm10941-204	471	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000367252.1	Gm10941-205	442	No protein	-	lncRNA	-
ENSMUST00000367256.1	Gm10941-209	418	No protein	-	lncRNA	-
ENSMUST00000367255.1	Gm10941-208	407	No protein	-	lncRNA	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 769 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENSMUST00000105408.5

Type

LncRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana (TAGENE) manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSMUST00000105408.5 Gm10941-201

Summary

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Transcript: ENSMUST00000105408.5 Gm10941-201

Summary

About Us

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