Transcript: ENSMUST00000178655.2 Cwc22rt5-202

Description

CWC22 spliceosome-associated protein, retrotransposed 5 [Source:MGI Symbol;Acc:MGI:3702064]

Gene Synonyms

Gm13694

Location

Chromosome 2: 83,809,982-83,810,768 forward strand.

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 1 variant allele and maps to 817 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000096337.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000178533.2	Cwc22rt5-201	2493	830aa	ENSMUSP00000135979.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AK42	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000178655.2	Cwc22rt5-202	732	243aa	ENSMUSP00000136971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QNR0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 732 bps, Translation length: 243 residues

Transcript Support Level (TSL)

TSL:5

Version

ENSMUST00000178655.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENSMUST00000178655.2 Cwc22rt5-202

Summary

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Transcript: ENSMUST00000178655.2 Cwc22rt5-202

Summary

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