Transcript: ENSMUST00000234003.2 Cetn1-202

Description

centrin 1 [Source:MGI Symbol;Acc:MGI:1347086]

Location

Chromosome 18: 9,618,419-9,619,469 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 24 domains and features, is associated with 492 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000050996.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000062769.7	Cetn1-201	1247	172aa	ENSMUSP00000057392.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37731	P41209	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000234003.2	Cetn1-202	1051	172aa	ENSMUSP00000157153.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37731	P41209	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000234590.2	Cetn1-203	1247	172aa	ENSMUSP00000157126.2	Nonsense mediated decay	CCDS37731	P41209	-

ID History

Stable ID

ENSMUST00000234003.2

Status

Current

Latest Version

ENSMUST00000234003.2

Release: 115 (current)

Assembly: GRCm39

Database: mus_musculus_core_115_39

Associated archived IDs for this stable ID version

No associated IDs found

Transcript: ENSMUST00000234003.2 Cetn1-202

ID History

Associated archived IDs for this stable ID version

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Transcript: ENSMUST00000234003.2 Cetn1-202

ID History

Associated archived IDs for this stable ID version

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