Transcript: ENSMUST00000196834.2 Lrrc2-203

Description

leucine rich repeat containing 2 [Source:MGI Symbol;Acc:MGI:1921499]

Gene Synonyms

2400002D05Rik, 4933431K03Rik

Location

Chromosome 9: 110,782,867-110,799,206 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 1604 variant alleles and maps to 50 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000032495.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000035076.9	Lrrc2-201	3657	371aa	ENSMUSP00000035076.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23580	A0A0R4J0F2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000196834.2	Lrrc2-203	666	184aa	ENSMUSP00000142360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A0G2JDG6	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000196598.2	Lrrc2-202	520	61aa	ENSMUSP00000143319.2	Nonsense mediated decay		A0A0G2JFV2	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

ID History

Stable ID

ENSMUST00000196834.2

Status

Current

Latest Version

ENSMUST00000196834.2

Release: 115 (current)

Assembly: GRCm39

Database: mus_musculus_core_115_39

Associated archived IDs for this stable ID version

No associated IDs found

Transcript: ENSMUST00000196834.2 Lrrc2-203

ID History

Associated archived IDs for this stable ID version

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Transcript: ENSMUST00000196834.2 Lrrc2-203

ID History

Associated archived IDs for this stable ID version

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