Transcript: ENSMUST00000040608.6 Gm44955-201

Description

predicted gene 44955 [Source:MGI Symbol;Acc:MGI:5753531]

Location

Chromosome 8: 10,974,140-10,978,909 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 714 variant alleles and maps to 124 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000109084.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000295428.1	Gm44955-208	861	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295439.1	Gm44955-219	3666	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000040608.6	Gm44955-201	3586	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000246384.2	Gm44955-207	3108	No protein	-	lncRNA	-
ENSMUST00000295440.1	Gm44955-220	2429	No protein	-	lncRNA	-
ENSMUST00000295441.1	Gm44955-221	2365	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000246308.2	Gm44955-206	1567	No protein	-	lncRNA	-
ENSMUST00000295430.1	Gm44955-210	1291	No protein	-	lncRNA	-
ENSMUST00000295431.1	Gm44955-211	1101	No protein	-	lncRNA	-
ENSMUST00000241826.2	Gm44955-204	1096	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000208615.4	Gm44955-202	1087	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000295437.1	Gm44955-217	1075	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295436.1	Gm44955-216	915	No protein	-	lncRNA	-
ENSMUST00000295432.1	Gm44955-212	897	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243571.2	Gm44955-205	861	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000295429.1	Gm44955-209	815	No protein	-	lncRNA	-
ENSMUST00000295433.1	Gm44955-213	788	No protein	-	lncRNA	-
ENSMUST00000295445.1	Gm44955-225	787	No protein	-	lncRNA	-
ENSMUST00000295447.1	Gm44955-227	771	No protein	-	lncRNA	-
ENSMUST00000295454.1	Gm44955-234	761	No protein	-	lncRNA	-
ENSMUST00000295450.1	Gm44955-230	737	No protein	-	lncRNA	-
ENSMUST00000295443.1	Gm44955-223	718	No protein	-	lncRNA	-
ENSMUST00000295448.1	Gm44955-228	705	No protein	-	lncRNA	-
ENSMUST00000295435.1	Gm44955-215	670	No protein	-	lncRNA	-
ENSMUST00000295444.1	Gm44955-224	661	No protein	-	lncRNA	-
ENSMUST00000295452.1	Gm44955-232	627	No protein	-	lncRNA	-
ENSMUST00000295438.1	Gm44955-218	580	No protein	-	lncRNA	-
ENSMUST00000295446.1	Gm44955-226	558	No protein	-	lncRNA	-
ENSMUST00000295455.1	Gm44955-235	524	No protein	-	lncRNA	-
ENSMUST00000295434.1	Gm44955-214	520	No protein	-	lncRNA	-
ENSMUST00000295442.1	Gm44955-222	501	No protein	-	lncRNA	-
ENSMUST00000295449.1	Gm44955-229	454	No protein	-	lncRNA	-
ENSMUST00000295453.1	Gm44955-233	396	No protein	-	lncRNA	-
ENSMUST00000295451.1	Gm44955-231	390	No protein	-	lncRNA	-
ENSMUST00000208843.2	Gm44955-203	229	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

ID History

Stable ID

ENSMUST00000040608.6

Status

Current

Latest Version

ENSMUST00000040608.6

Release: 116 (current)

Assembly: GRCm39

Database: mus_musculus_core_116_39

Associated archived IDs for this stable ID version

No associated IDs found

Upcoming Ensembl Platform Transition

Transcript: ENSMUST00000040608.6 Gm44955-201

ID History

Associated archived IDs for this stable ID version

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Transcript: ENSMUST00000040608.6 Gm44955-201

ID History

Associated archived IDs for this stable ID version

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