Transcript: ENSMUST00000036407.6 Fhip2a-201

Description

FHF complex subunit HOOK interacting protein 2A [Source:MGI Symbol;Acc:MGI:2147545]

Gene Synonyms

Fam160b1

Location

Chromosome 19: 57,349,112-57,378,018 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 9 domains and features, is associated with 2204 variant alleles and maps to 386 oligo probes.

Gene

This transcript is a product of gene ENSMUSG00000033478.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000036407.6	Fhip2a-201	5951	764aa	ENSMUSP00000048903.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29925	Q8CDM8-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000249616.1	Fhip2a-203	5951	796aa	ENSMUSP00000159825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0AA74KTG1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000237170.2	Fhip2a-202	5110	180aa	ENSMUSP00000157398.2	Nonsense mediated decay		A0A494B8X9	-

ID History

Stable ID

ENSMUST00000036407.6

Status

Current

Latest Version

ENSMUST00000036407.6

Release: 116 (current)

Assembly: GRCm39

Database: mus_musculus_core_116_39

Associated archived IDs for this stable ID version

No associated IDs found

Upcoming Ensembl Platform Transition

Transcript: ENSMUST00000036407.6 Fhip2a-201

ID History

Associated archived IDs for this stable ID version

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Transcript: ENSMUST00000036407.6 Fhip2a-201

ID History

Associated archived IDs for this stable ID version

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