Gene: Ccdc198 ENSMUSG00000021850

Description

coiled-coil domain containing 198 [Source:MGI Symbol;Acc:MGI:1914332]

Gene Synonyms

1700011H14Rik

Location

Chromosome 14: 49,457,045-49,482,931 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 5 transcripts (splice variants), 112 orthologues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000228936.2	Ccdc198-205	3444	294aa	ENSMUSP00000154726.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26996	Q9CPZ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000022398.15	Ccdc198-201	1349	303aa	ENSMUSP00000022398.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2K6EDK1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000227113.2	Ccdc198-204	798	251aa	ENSMUSP00000153946.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2I3BPW4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000130853.2	Ccdc198-202	790	216aa	ENSMUSP00000117775.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A9C480	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000148109.2	Ccdc198-203	800	65aa	ENSMUSP00000114834.2	Nonsense mediated decay		D6RDQ1	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Gene: Ccdc198 ENSMUSG00000021850

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Gene: Ccdc198 ENSMUSG00000021850

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