Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Vmn2r90 ENSMUSG00000092120

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Description

vomeronasal 2, receptor 90 [Source:MGI Symbol;Acc:MGI:3645076]

Gene Synonyms

EG626942

Location

Chromosome 17: 17,924,009-17,955,418 forward strand.

GRCm39:CM001010.3

About this gene

This gene has 4 transcripts (splice variants), 116 orthologues and 128 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000169805.3	Vmn2r90-201	3775	863aa	ENSMUSP00000126650.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49966	E9PXJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000232078.2	Vmn2r90-203	3545	96aa	ENSMUSP00000156025.2	Nonsense mediated decay		A0A338P6K0	-
ENSMUST00000232113.2	Vmn2r90-204	2711	120aa	ENSMUSP00000155881.2	Nonsense mediated decay		A0A338P698	-
ENSMUST00000231659.2	Vmn2r90-202	2676	74aa	ENSMUSP00000156120.2	Nonsense mediated decay		A0A338P772	-

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Summary

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