Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Vmn2r3 ENSMUSG00000091572

.

Description

vomeronasal 2, receptor 3 [Source:MGI Symbol;Acc:MGI:3643995]

Gene Synonyms

EG637004

Location

Chromosome 3: 64,164,636-64,197,130 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 9 transcripts (splice variants), 132 orthologues and 128 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000176328.9	Vmn2r3-202	5149	909aa	ENSMUSP00000134891.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BJ88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000233531.2	Vmn2r3-206	4291	623aa	ENSMUSP00000156505.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WAT3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000170244.3	Vmn2r3-201	2670	887aa	ENSMUSP00000126165.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50920	E9Q107	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000232849.2	Vmn2r3-203	10927	572aa	ENSMUSP00000156591.2	Nonsense mediated decay		A0A3B2WAY9	-
ENSMUST00000233938.2	Vmn2r3-208	7019	470aa	ENSMUSP00000156667.2	Nonsense mediated decay		A0A3B2WCS9	-
ENSMUST00000233015.2	Vmn2r3-204	5671	180aa	ENSMUSP00000156953.2	Nonsense mediated decay		A0A3B2W8B1	-
ENSMUST00000233952.2	Vmn2r3-209	5380	470aa	ENSMUSP00000156429.2	Nonsense mediated decay		A0A3B2W3I1	-
ENSMUST00000233608.2	Vmn2r3-207	8583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000233241.2	Vmn2r3-205	8141	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

.

Summary

.

.