Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Gene: Umps ENSMUSG00000022814

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Description

uridine monophosphate synthetase [Source:MGI Symbol;Acc:MGI:1298388]

Gene Synonyms

1700095D23Rik

Location

Chromosome 16: 33,775,152-33,787,408 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 2 transcripts (splice variants) and 221 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023510.7	Umps-201	3484	481aa	ENSMUSP00000023510.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28136	P13439 Q544K9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000131990.2	Umps-202	3283	57aa	ENSMUSP00000119423.2	Nonsense mediated decay		D6RJ62	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

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Summary

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