Gene: Tent2 ENSMUSG00000042167

Description

terminal nucleotidyltransferase 2 [Source:MGI Symbol;Acc:MGI:2140950]

Gene Synonyms

8030446C20Rik, Papd4

Location

Chromosome 13: 93,282,790-93,328,893 reverse strand.

GRCm39:CM001006.3

About this gene

This gene has 6 transcripts (splice variants), 202 orthologues, 4 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000048702.7	Tent2-201	2990	484aa	ENSMUSP00000048124.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26686	Q91YI6-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000225868.2	Tent2-205	3081	480aa	ENSMUSP00000153703.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q91YI6-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSMUST00000224464.2	Tent2-203	821	155aa	ENSMUSP00000153060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YCM6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000226081.2	Tent2-206	602	99aa	ENSMUSP00000153685.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A286YED5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000224545.2	Tent2-204	788	158aa	ENSMUSP00000153339.2	Nonsense mediated decay		A0A286YDA7	-
ENSMUST00000223975.2	Tent2-202	502	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Tent2 ENSMUSG00000042167

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Gene: Tent2 ENSMUSG00000042167

Summary

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