Gene: Snhg20 ENSMUSG00000086859

Description

small nucleolar RNA host gene 20 [Source:MGI Symbol;Acc:MGI:1924222]

Gene Synonyms

2810008D09Rik

Location

Chromosome 11: 116,966,617-116,969,792 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 26 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000328754.1	Snhg20-208	477	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000182811.4	Snhg20-203	2243	No protein	-	lncRNA	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000328759.1	Snhg20-213	1947	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000149822.5	Snhg20-202	1336	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000328768.1	Snhg20-222	1322	No protein	-	lncRNA	-
ENSMUST00000233355.2	Snhg20-206	1090	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000232907.3	Snhg20-205	1013	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000328755.1	Snhg20-209	729	No protein	-	lncRNA	-
ENSMUST00000328763.1	Snhg20-217	685	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000328769.1	Snhg20-223	679	No protein	-	lncRNA	-
ENSMUST00000232695.3	Snhg20-204	641	No protein	-	lncRNA	-
ENSMUST00000328770.1	Snhg20-224	611	No protein	-	lncRNA	-
ENSMUST00000328766.1	Snhg20-220	599	No protein	-	lncRNA	-
ENSMUST00000328764.1	Snhg20-218	591	No protein	-	lncRNA	-
ENSMUST00000233685.3	Snhg20-207	554	No protein	-	lncRNA	-
ENSMUST00000328760.1	Snhg20-214	512	No protein	-	lncRNA	-
ENSMUST00000328761.1	Snhg20-215	482	No protein	-	lncRNA	-
ENSMUST00000328757.1	Snhg20-211	470	No protein	-	lncRNA	-
ENSMUST00000145438.2	Snhg20-201	459	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000328765.1	Snhg20-219	452	No protein	-	lncRNA	-
ENSMUST00000328772.1	Snhg20-226	420	No protein	-	lncRNA	-
ENSMUST00000328762.1	Snhg20-216	404	No protein	-	lncRNA	-
ENSMUST00000328758.1	Snhg20-212	361	No protein	-	lncRNA	-
ENSMUST00000328756.1	Snhg20-210	326	No protein	-	lncRNA	-
ENSMUST00000328767.1	Snhg20-221	287	No protein	-	lncRNA	-
ENSMUST00000328771.1	Snhg20-225	257	No protein	-	lncRNA	-

Gene: Snhg20 ENSMUSG00000086859

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Gene: Snhg20 ENSMUSG00000086859

Summary

About Us

Get help

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