Summary
- Splice variants
- Transcript comparison
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Gene: Slfn5os ENSMUSG00000086327

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Description

schlafen 5, opposite strand [Source:MGI Symbol;Acc:MGI:1923642]

Gene Synonyms

1700003F17Rik

Location

Chromosome 11: 82,824,893-82,851,536 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000363845.1	Slfn5os-203	872	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000363852.1	Slfn5os-210	1465	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363847.1	Slfn5os-205	1394	No protein	-	lncRNA		-
ENSMUST00000363848.1	Slfn5os-206	917	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363846.1	Slfn5os-204	787	No protein	-	lncRNA		-
ENSMUST00000363853.1	Slfn5os-211	764	No protein	-	lncRNA		-
ENSMUST00000363850.1	Slfn5os-208	753	No protein	-	lncRNA		-
ENSMUST00000363856.1	Slfn5os-214	628	No protein	-	lncRNA		-
ENSMUST00000216469.3	Slfn5os-202	624	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000127074.3	Slfn5os-201	618	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000363851.1	Slfn5os-209	609	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363849.1	Slfn5os-207	569	No protein	-	lncRNA		-
ENSMUST00000363855.1	Slfn5os-213	458	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000363854.1	Slfn5os-212	328	No protein	-	lncRNA		-

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Summary

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